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The following commands should be valid for every setup (docker/debian/sqlite/postgres) but check your installation directory first. This includes database, configuration, custom user locales, logs, images and thumbnails.

cd /opt/gancio/ # or /home/gancio or where your installation is
tar  -czf gancio-$(date +%Y-%m-%d-%H%M%S)-backup.tgz  \
  $(ls -d config.json uploads user_locale db.sqlite postgres data logs 2> /dev/null)

Permission denied

postgres directory could have different permission or owner, in this case you need to be root or use sudo instead.

Automatic backup

To periodically backup your data you should probably use something like restic or borg